| Package | de.medizininformatikinitiative.kerndatensatz.biobank |
| Type | StructureDefinition |
| Id | Id |
| FHIR Version | R4 |
| Source | https://simplifier.net/resolve?scope=de.medizininformatikinitiative.kerndatensatz.biobank@2025.0.1&canonical=https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/SpecimenCore |
| Url | https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/SpecimenCore |
| Version | 2025.0.1 |
| Status | active |
| Name | ProfileSpecimenBioprobeCore |
| Title | Profile - Specimen - Bioprobe - Core |
| Experimental | False |
| Description | Basisiprofil zur Abbildung einer MII Bioprobe. Nicht zur direkten Implementierung gedacht, Module leiten bei Bedarf eigene Profile von diesem Profil ab. |
| Type | Specimen |
| Kind | resource |
| StructureDefinition | |
https://www.medizininformatik-initiative.de/fhir/ext/modul-patho/StructureDefinition/mii-pr-patho-specimen  | MII PR Patho Specimen |
| https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Specimen | Profile - Specimen - Bioprobe |
FHIR{
"resourceType" : "StructureDefinition",
"id" : "SpecimenCore",
"url" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/SpecimenCore",
"version" : "2025.0.1",
"name" : "ProfileSpecimenBioprobeCore",
"title" : "Profile - Specimen - Bioprobe - Core",
"status" : "active",
"description" : "Basisiprofil zur Abbildung einer MII Bioprobe. Nicht zur direkten Implementierung gedacht, Module leiten bei Bedarf eigene Profile von diesem Profil ab.",
"fhirVersion" : "4.0.1",
"kind" : "resource",
"abstract" : false,
"type" : "Specimen",
"baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Specimen",
"derivation" : "constraint",
"snapshot" : {
"element" : [
{
"id" : "Specimen",
"path" : "Specimen",
"short" : "Sample for analysis",
"definition" : "A sample to be used for analysis.",
"min" : 0,
"max" : "*",
"base" : {
"path" : "Specimen",
"min" : 0,
"max" : "*"
},
"constraint" : [
{
"key" : "dom-2",
"severity" : "error",
"human" : "If the resource is contained in another resource, it SHALL NOT contain nested Resources",
"expression" : "contained.contained.empty()",
"xpath" : "not(parent::f:contained and f:contained)",
"source" : "http://hl7.org/fhir/StructureDefinition/DomainResource"
},
{
"key" : "dom-4",
"severity" : "error",
"human" : "If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated",
"expression" : "contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()",
"xpath" : "not(exists(f:contained/*/f:meta/f:versionId)) and not(exists(f:contained/*/f:meta/f:lastUpdated))",
"source" : "http://hl7.org/fhir/StructureDefinition/DomainResource"
},
{
"key" : "dom-3",
"severity" : "error",
"human" : "If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource",
"expression" : "contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()",
"xpath" : "not(exists(for $id in f:contained/*/f:id/@value return $contained[not(parent::*/descendant::f:reference/@value=concat('#', $contained/*/id/@value) or descendant::f:reference[@value='#'])]))",
"source" : "http://hl7.org/fhir/StructureDefinition/DomainResource"
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice",
"valueBoolean" : true
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bestpractice-explanation",
"valueMarkdown" : "When a resource has no narrative, only systems that fully understand the data can display the resource to a human safely. Including a human readable representation in the resource makes for a much more robust eco-system and cheaper handling of resources by intermediary systems. Some ecosystems restrict distribution of resources to only those systems that do fully understand the resources, and as a consequence implementers may believe that the narrative is superfluous. However experience shows that such eco-systems often open up to new participants over time."
}
],
"key" : "dom-6",
"severity" : "warning",
"human" : "A resource should have narrative for robust management",
"expression" : "text.`div`.exists()",
"xpath" : "exists(f:text/h:div)",
"source" : "http://hl7.org/fhir/StructureDefinition/DomainResource"
},
{
"key" : "dom-5",
"severity" : "error",
"human" : "If a resource is contained in another resource, it SHALL NOT have a security label",
"expression" : "contained.meta.security.empty()",
"xpath" : "not(exists(f:contained/*/f:meta/f:security))",
"source" : "http://hl7.org/fhir/StructureDefinition/DomainResource"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "Entity. Role, or Act"
},
{
"identity" : "rim",
"map" : "Role[classCode=SPEC]"
}
]
},
{
"id" : "Specimen.id",
"path" : "Specimen.id",
"short" : "Logical id of this artifact",
"definition" : "The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.",
"comment" : "The only time that a resource does not have an id is when it is being submitted to the server using a create operation.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Resource.id",
"min" : 0,
"max" : "1"
},
"type" : [
{
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type",
"valueUrl" : "string"
}
],
"code" : "http://hl7.org/fhirpath/System.String"
}
],
"isSummary" : true
},
{
"id" : "Specimen.meta",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.meta",
"short" : "Metadata about the resource",
"definition" : "The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Resource.meta",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "Meta"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.implicitRules",
"path" : "Specimen.implicitRules",
"short" : "A set of rules under which this content was created",
"definition" : "A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.",
"comment" : "Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of it's narrative along with other profiles, value sets, etc.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Resource.implicitRules",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "uri"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isModifier" : true,
"isModifierReason" : "This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation",
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
}
]
},
{
"id" : "Specimen.language",
"path" : "Specimen.language",
"short" : "Language of the resource content",
"definition" : "The base language in which the resource is written.",
"comment" : "Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Resource.language",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "code"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"binding" : {
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-maxValueSet",
"valueCanonical" : "http://hl7.org/fhir/ValueSet/all-languages"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName",
"valueString" : "Language"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-isCommonBinding",
"valueBoolean" : true
}
],
"strength" : "preferred",
"description" : "A human language.",
"valueSet" : "http://hl7.org/fhir/ValueSet/languages"
},
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
}
]
},
{
"id" : "Specimen.text",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.text",
"short" : "Text summary of the resource, for human interpretation",
"definition" : "A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.",
"comment" : "Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a \"text blob\" or where text is additionally entered raw or narrated and encoded information is added later.",
"alias" : [
"narrative",
"html",
"xhtml",
"display"
],
"min" : 0,
"max" : "1",
"base" : {
"path" : "DomainResource.text",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "Narrative"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
},
{
"identity" : "rim",
"map" : "Act.text?"
}
]
},
{
"id" : "Specimen.contained",
"path" : "Specimen.contained",
"short" : "Contained, inline Resources",
"definition" : "These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.",
"comment" : "This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags In their meta elements, but SHALL NOT have security labels.",
"alias" : [
"inline resources",
"anonymous resources",
"contained resources"
],
"min" : 0,
"max" : "*",
"base" : {
"path" : "DomainResource.contained",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Resource"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "Entity. Role, or Act"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.extension",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.extension",
"slicing" : {
"discriminator" : [
{
"type" : "value",
"path" : "url"
}
],
"description" : "Extensions are always sliced by (at least) url",
"rules" : "open"
},
"short" : "Additional content defined by implementations",
"definition" : "May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.",
"comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.",
"alias" : [
"extensions",
"user content"
],
"min" : 0,
"max" : "*",
"base" : {
"path" : "DomainResource.extension",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Extension"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ext-1",
"severity" : "error",
"human" : "Must have either extensions or value[x], not both",
"expression" : "extension.exists() != value.exists()",
"xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Extension"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.modifierExtension",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.modifierExtension",
"slicing" : {
"discriminator" : [
{
"type" : "value",
"path" : "url"
}
],
"description" : "Extensions are always sliced by (at least) url",
"rules" : "open"
},
"short" : "Extensions that cannot be ignored",
"definition" : "May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).",
"comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.",
"requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](extensibility.html#modifierExtension).",
"alias" : [
"extensions",
"user content"
],
"min" : 0,
"max" : "*",
"base" : {
"path" : "DomainResource.modifierExtension",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Extension"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ext-1",
"severity" : "error",
"human" : "Must have either extensions or value[x], not both",
"expression" : "extension.exists() != value.exists()",
"xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Extension"
}
],
"isModifier" : true,
"isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them",
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.identifier",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.identifier",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Proben-ID"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Specimen ID"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Einrichtungsinterner Identifier der Probe."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Internal identifier of the specimen at the institution."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"min" : 0,
"max" : "*",
"base" : {
"path" : "Specimen.identifier",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Identifier"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mustSupport" : true,
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "CX / EI (occasionally, more often EI maps to a resource id or a URL)"
},
{
"identity" : "rim",
"map" : "II - The Identifier class is a little looser than the v3 type II because it allows URIs as well as registered OIDs or GUIDs. Also maps to Role[classCode=IDENT]"
},
{
"identity" : "servd",
"map" : "Identifier"
},
{
"identity" : "w5",
"map" : "FiveWs.identifier"
},
{
"identity" : "v2",
"map" : "SPM-2"
},
{
"identity" : "rim",
"map" : ".id"
}
]
},
{
"id" : "Specimen.accessionIdentifier",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.accessionIdentifier",
"short" : "Identifier assigned by the lab",
"definition" : "The identifier assigned by the lab when accessioning specimen(s). This is not necessarily the same as the specimen identifier, depending on local lab procedures.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Specimen.accessionIdentifier",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "Identifier"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "CX / EI (occasionally, more often EI maps to a resource id or a URL)"
},
{
"identity" : "rim",
"map" : "II - The Identifier class is a little looser than the v3 type II because it allows URIs as well as registered OIDs or GUIDs. Also maps to Role[classCode=IDENT]"
},
{
"identity" : "servd",
"map" : "Identifier"
},
{
"identity" : "w5",
"map" : "FiveWs.identifier"
},
{
"identity" : "v2",
"map" : "SPM-30 (v2.7+)"
},
{
"identity" : "rim",
"map" : ".participation[typeCode=SBJ].act[classCode=ACSN, moodCode=EVN].id"
}
]
},
{
"id" : "Specimen.status",
"path" : "Specimen.status",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Verfügbarkeitsstatus"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Availability status"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Der Status der Probe in Bezug auf die Verfügbarkeit für Forschung."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The status of the specimen in terms of its availability for research."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"comment" : "This element is labeled as a modifier because the status contains codes that mark the resource as not currently valid.",
"min" : 1,
"max" : "1",
"base" : {
"path" : "Specimen.status",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "code"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mustSupport" : true,
"isModifier" : true,
"isModifierReason" : "This element is labelled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid",
"isSummary" : true,
"binding" : {
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName",
"valueString" : "SpecimenStatus"
}
],
"strength" : "required",
"description" : "Codes providing the status/availability of a specimen.",
"valueSet" : "http://hl7.org/fhir/ValueSet/specimen-status|4.0.1"
},
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "w5",
"map" : "FiveWs.status"
},
{
"identity" : "v2",
"map" : "SPM-20"
},
{
"identity" : "rim",
"map" : "status"
}
]
},
{
"id" : "Specimen.type",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.type",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Probenart"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Specimen type"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Die Art der Probe, codiert in SNOMED CT."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The type of the specimen, encoded as SNOMED CT code."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"comment" : "The type can change the way that a specimen is handled and drives what kind of analyses can properly be performed on the specimen. It is frequently used in diagnostic work flow decision making systems.",
"min" : 1,
"max" : "1",
"base" : {
"path" : "Specimen.type",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "CodeableConcept"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mustSupport" : true,
"isSummary" : true,
"binding" : {
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName",
"valueString" : "SpecimenType"
}
],
"strength" : "example",
"description" : "The type of the specimen.",
"valueSet" : "http://terminology.hl7.org/ValueSet/v2-0487"
},
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "CE/CNE/CWE"
},
{
"identity" : "rim",
"map" : "CD"
},
{
"identity" : "orim",
"map" : "fhir:CodeableConcept rdfs:subClassOf dt:CD"
},
{
"identity" : "w5",
"map" : "FiveWs.what[x]"
},
{
"identity" : "v2",
"map" : "SPM-4 and possibly SPM-5"
},
{
"identity" : "rim",
"map" : ".code"
}
]
},
{
"id" : "Specimen.type.id",
"path" : "Specimen.type.id",
"representation" : [
"xmlAttr"
],
"short" : "Unique id for inter-element referencing",
"definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Element.id",
"min" : 0,
"max" : "1"
},
"type" : [
{
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type",
"valueUrl" : "string"
}
],
"code" : "http://hl7.org/fhirpath/System.String"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
}
]
},
{
"id" : "Specimen.type.extension",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.type.extension",
"slicing" : {
"discriminator" : [
{
"type" : "value",
"path" : "url"
}
],
"description" : "Extensions are always sliced by (at least) url",
"rules" : "open"
},
"short" : "Additional content defined by implementations",
"definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.",
"comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.",
"alias" : [
"extensions",
"user content"
],
"min" : 0,
"max" : "*",
"base" : {
"path" : "Element.extension",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Extension"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ext-1",
"severity" : "error",
"human" : "Must have either extensions or value[x], not both",
"expression" : "extension.exists() != value.exists()",
"xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Extension"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.type.coding",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.type.coding",
"slicing" : {
"discriminator" : [
{
"type" : "pattern",
"path" : "$this.system"
}
],
"rules" : "open"
},
"short" : "Code defined by a terminology system",
"definition" : "A reference to a code defined by a terminology system.",
"comment" : "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.",
"requirements" : "Allows for alternative encodings within a code system, and translations to other code systems.",
"min" : 1,
"max" : "*",
"base" : {
"path" : "CodeableConcept.coding",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Coding"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "CE/CNE/CWE subset one of the sets of component 1-3 or 4-6"
},
{
"identity" : "rim",
"map" : "CV"
},
{
"identity" : "orim",
"map" : "fhir:Coding rdfs:subClassOf dt:CDCoding"
},
{
"identity" : "v2",
"map" : "C*E.1-8, C*E.10-22"
},
{
"identity" : "rim",
"map" : "union(., ./translation)"
},
{
"identity" : "orim",
"map" : "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding"
}
]
},
{
"id" : "Specimen.type.coding:sct",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.type.coding",
"sliceName" : "sct",
"short" : "Code defined by a terminology system",
"definition" : "A reference to a code defined by a terminology system.",
"comment" : "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.",
"requirements" : "Allows for alternative encodings within a code system, and translations to other code systems.",
"min" : 1,
"max" : "*",
"base" : {
"path" : "CodeableConcept.coding",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Coding"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"binding" : {
"strength" : "extensible",
"valueSet" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/ValueSet/probenart"
},
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "CE/CNE/CWE subset one of the sets of component 1-3 or 4-6"
},
{
"identity" : "rim",
"map" : "CV"
},
{
"identity" : "orim",
"map" : "fhir:Coding rdfs:subClassOf dt:CDCoding"
},
{
"identity" : "v2",
"map" : "C*E.1-8, C*E.10-22"
},
{
"identity" : "rim",
"map" : "union(., ./translation)"
},
{
"identity" : "orim",
"map" : "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding"
}
]
},
{
"id" : "Specimen.type.coding:sct.id",
"path" : "Specimen.type.coding.id",
"representation" : [
"xmlAttr"
],
"short" : "Unique id for inter-element referencing",
"definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Element.id",
"min" : 0,
"max" : "1"
},
"type" : [
{
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type",
"valueUrl" : "string"
}
],
"code" : "http://hl7.org/fhirpath/System.String"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
}
]
},
{
"id" : "Specimen.type.coding:sct.extension",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.type.coding.extension",
"slicing" : {
"discriminator" : [
{
"type" : "value",
"path" : "url"
}
],
"description" : "Extensions are always sliced by (at least) url",
"rules" : "open"
},
"short" : "Additional content defined by implementations",
"definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.",
"comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.",
"alias" : [
"extensions",
"user content"
],
"min" : 0,
"max" : "*",
"base" : {
"path" : "Element.extension",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Extension"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ext-1",
"severity" : "error",
"human" : "Must have either extensions or value[x], not both",
"expression" : "extension.exists() != value.exists()",
"xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Extension"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.type.coding:sct.system",
"path" : "Specimen.type.coding.system",
"short" : "Identity of the terminology system",
"definition" : "The identification of the code system that defines the meaning of the symbol in the code.",
"comment" : "The URI may be an OID (urn:oid:...) or a UUID (urn:uuid:...). OIDs and UUIDs SHALL be references to the HL7 OID registry. Otherwise, the URI should come from HL7's list of FHIR defined special URIs or it should reference to some definition that establishes the system clearly and unambiguously.",
"requirements" : "Need to be unambiguous about the source of the definition of the symbol.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.system",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "uri"
}
],
"patternUri" : "http://snomed.info/sct",
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.3"
},
{
"identity" : "rim",
"map" : "./codeSystem"
},
{
"identity" : "orim",
"map" : "fhir:Coding.system rdfs:subPropertyOf dt:CDCoding.codeSystem"
}
]
},
{
"id" : "Specimen.type.coding:sct.version",
"path" : "Specimen.type.coding.version",
"short" : "Version of the system - if relevant",
"definition" : "The version of the code system which was used when choosing this code. Note that a well-maintained code system does not need the version reported, because the meaning of codes is consistent across versions. However this cannot consistently be assured, and when the meaning is not guaranteed to be consistent, the version SHOULD be exchanged.",
"comment" : "Where the terminology does not clearly define what string should be used to identify code system versions, the recommendation is to use the date (expressed in FHIR date format) on which that version was officially published as the version date.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.version",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "string"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.7"
},
{
"identity" : "rim",
"map" : "./codeSystemVersion"
},
{
"identity" : "orim",
"map" : "fhir:Coding.version rdfs:subPropertyOf dt:CDCoding.codeSystemVersion"
}
]
},
{
"id" : "Specimen.type.coding:sct.code",
"path" : "Specimen.type.coding.code",
"short" : "Symbol in syntax defined by the system",
"definition" : "A symbol in syntax defined by the system. The symbol may be a predefined code or an expression in a syntax defined by the coding system (e.g. post-coordination).",
"comment" : "Note that FHIR strings SHALL NOT exceed 1MB in size",
"requirements" : "Need to refer to a particular code in the system.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.code",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "code"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.1"
},
{
"identity" : "rim",
"map" : "./code"
},
{
"identity" : "orim",
"map" : "fhir:Coding.code rdfs:subPropertyOf dt:CDCoding.code"
}
]
},
{
"id" : "Specimen.type.coding:sct.display",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable",
"valueBoolean" : true
}
],
"path" : "Specimen.type.coding.display",
"short" : "Representation defined by the system",
"definition" : "A representation of the meaning of the code in the system, following the rules of the system.",
"comment" : "Note that FHIR strings SHALL NOT exceed 1MB in size",
"requirements" : "Need to be able to carry a human-readable meaning of the code for readers that do not know the system.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.display",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "string"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.2 - but note this is not well followed"
},
{
"identity" : "rim",
"map" : "CV.displayName"
},
{
"identity" : "orim",
"map" : "fhir:Coding.display rdfs:subPropertyOf dt:CDCoding.displayName"
}
]
},
{
"id" : "Specimen.type.coding:sct.userSelected",
"path" : "Specimen.type.coding.userSelected",
"short" : "If this coding was chosen directly by the user",
"definition" : "Indicates that this coding was chosen by a user directly - e.g. off a pick list of available items (codes or displays).",
"comment" : "Amongst a set of alternatives, a directly chosen code is the most appropriate starting point for new translations. There is some ambiguity about what exactly 'directly chosen' implies, and trading partner agreement may be needed to clarify the use of this element and its consequences more completely.",
"requirements" : "This has been identified as a clinical safety criterium - that this exact system/code pair was chosen explicitly, rather than inferred by the system based on some rules or language processing.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.userSelected",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "boolean"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "Sometimes implied by being first"
},
{
"identity" : "rim",
"map" : "CD.codingRationale"
},
{
"identity" : "orim",
"map" : "fhir:Coding.userSelected fhir:mapsTo dt:CDCoding.codingRationale. fhir:Coding.userSelected fhir:hasMap fhir:Coding.userSelected.map. fhir:Coding.userSelected.map a fhir:Map; fhir:target dt:CDCoding.codingRationale. fhir:Coding.userSelected\\#true a [ fhir:source \"true\"; fhir:target dt:CDCoding.codingRationale\\#O ]"
}
]
},
{
"id" : "Specimen.type.text",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable",
"valueBoolean" : true
}
],
"path" : "Specimen.type.text",
"short" : "Plain text representation of the concept",
"definition" : "A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.",
"comment" : "Very often the text is the same as a displayName of one of the codings.",
"requirements" : "The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "CodeableConcept.text",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "string"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.9. But note many systems use C*E.2 for this"
},
{
"identity" : "rim",
"map" : "./originalText[mediaType/code=\"text/plain\"]/data"
},
{
"identity" : "orim",
"map" : "fhir:CodeableConcept.text rdfs:subPropertyOf dt:CD.originalText"
}
]
},
{
"id" : "Specimen.subject",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.subject",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Patient:in"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Patient"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Verweis auf die Person, von der die Probe stammt."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Reference to the person from whom the specimen was collected."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"comment" : "References SHALL be a reference to an actual FHIR resource, and SHALL be resolveable (allowing for access control, temporary unavailability, etc.). Resolution can be either by retrieval from the URL, or, where applicable by resource type, by treating an absolute reference as a canonical URL and looking it up in a local registry/repository.",
"requirements" : "Must know the subject context.",
"min" : 1,
"max" : "1",
"base" : {
"path" : "Specimen.subject",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "Reference",
"targetProfile" : [
"http://hl7.org/fhir/StructureDefinition/Patient"
]
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ref-1",
"severity" : "error",
"human" : "SHALL have a contained resource if a local reference is provided",
"expression" : "reference.startsWith('#').not() or (reference.substring(1).trace('url') in %rootResource.contained.id.trace('ids'))",
"xpath" : "not(starts-with(f:reference/@value, '#')) or exists(ancestor::*[self::f:entry or self::f:parameter]/f:resource/f:*/f:contained/f:*[f:id/@value=substring-after(current()/f:reference/@value, '#')]|/*/f:contained/f:*[f:id/@value=substring-after(current()/f:reference/@value, '#')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Reference"
}
],
"mustSupport" : true,
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "The target of a resource reference is a RIM entry point (Act, Role, or Entity)"
},
{
"identity" : "w5",
"map" : "FiveWs.subject[x]"
},
{
"identity" : "rim",
"map" : ".scoper or .scoper.playsRole"
},
{
"identity" : "w5",
"map" : "FiveWs.subject"
}
]
},
{
"id" : "Specimen.receivedTime",
"path" : "Specimen.receivedTime",
"short" : "The time when specimen was received for processing",
"definition" : "Time when specimen was received for processing or testing.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Specimen.receivedTime",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "dateTime"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "w5",
"map" : "FiveWs.done[x]"
},
{
"identity" : "v2",
"map" : "SPM-18"
},
{
"identity" : "rim",
"map" : ".participation[typeCode=SBJ].act[code=SPCREC, moodCode=EVN].effectiveTime"
}
]
},
{
"id" : "Specimen.parent",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.parent",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Ist gewonnen aus"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Derived from"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Referenz auf eine übergeordnete Probe, aus der diese Probe gewonnen wurde."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Reference to a parent specimen from which this specimen was derived."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"comment" : "The parent specimen could be the source from which the current specimen is derived by some processing step (e.g. an aliquot or isolate or extracted nucleic acids from clinical samples) or one of many specimens that were combined to create a pooled sample.",
"min" : 0,
"max" : "*",
"base" : {
"path" : "Specimen.parent",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Reference",
"targetProfile" : [
"http://hl7.org/fhir/StructureDefinition/Specimen"
]
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ref-1",
"severity" : "error",
"human" : "SHALL have a contained resource if a local reference is provided",
"expression" : "reference.startsWith('#').not() or (reference.substring(1).trace('url') in %rootResource.contained.id.trace('ids'))",
"xpath" : "not(starts-with(f:reference/@value, '#')) or exists(ancestor::*[self::f:entry or self::f:parameter]/f:resource/f:*/f:contained/f:*[f:id/@value=substring-after(current()/f:reference/@value, '#')]|/*/f:contained/f:*[f:id/@value=substring-after(current()/f:reference/@value, '#')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Reference"
}
],
"mustSupport" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "The target of a resource reference is a RIM entry point (Act, Role, or Entity)"
},
{
"identity" : "rim",
"map" : ".scoper (if parent) .player.scopesRole[classCode=SPEC].player (if child)"
}
]
},
{
"id" : "Specimen.request",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.request",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Entnahme-ID"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Collection ID"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Der Identifier der Probenentnahme."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The identifier for the specimen collection."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"comment" : "The request may be explicit or implied such with a ServiceRequest that requires a blood draw.",
"min" : 0,
"max" : "*",
"base" : {
"path" : "Specimen.request",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Reference",
"targetProfile" : [
"http://hl7.org/fhir/StructureDefinition/ServiceRequest"
]
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ref-1",
"severity" : "error",
"human" : "SHALL have a contained resource if a local reference is provided",
"expression" : "reference.startsWith('#').not() or (reference.substring(1).trace('url') in %rootResource.contained.id.trace('ids'))",
"xpath" : "not(starts-with(f:reference/@value, '#')) or exists(ancestor::*[self::f:entry or self::f:parameter]/f:resource/f:*/f:contained/f:*[f:id/@value=substring-after(current()/f:reference/@value, '#')]|/*/f:contained/f:*[f:id/@value=substring-after(current()/f:reference/@value, '#')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Reference"
}
],
"mustSupport" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "The target of a resource reference is a RIM entry point (Act, Role, or Entity)"
},
{
"identity" : "w5",
"map" : "FiveWs.why[x]"
},
{
"identity" : "v2",
"map" : "ORC? OBR-2/3?"
},
{
"identity" : "rim",
"map" : "outboundRelationship[typeCode=FLFS].target"
}
]
},
{
"id" : "Specimen.collection",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.collection",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Probenentnahme"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Specimen sampling"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Informationen über den Prozess der Probenentnahme, einschließlich Entnahmezeitpunkt und -stelle."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Information about the specimen collection process, including collection time and site."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"min" : 1,
"max" : "1",
"base" : {
"path" : "Specimen.collection",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "BackboneElement"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mustSupport" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "SPM-14"
},
{
"identity" : "rim",
"map" : ".participation[typeCode=SBJ].act[classCode=SPECCOLLECT, moodCode=EVN]"
}
]
},
{
"id" : "Specimen.collection.id",
"path" : "Specimen.collection.id",
"representation" : [
"xmlAttr"
],
"short" : "Unique id for inter-element referencing",
"definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Element.id",
"min" : 0,
"max" : "1"
},
"type" : [
{
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type",
"valueUrl" : "string"
}
],
"code" : "http://hl7.org/fhirpath/System.String"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
}
]
},
{
"id" : "Specimen.collection.extension",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.collection.extension",
"slicing" : {
"discriminator" : [
{
"type" : "value",
"path" : "url"
}
],
"description" : "Extensions are always sliced by (at least) url",
"ordered" : false,
"rules" : "open"
},
"short" : "Additional content defined by implementations",
"definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.",
"comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.",
"alias" : [
"extensions",
"user content"
],
"min" : 0,
"max" : "*",
"base" : {
"path" : "Element.extension",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Extension"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ext-1",
"severity" : "error",
"human" : "Must have either extensions or value[x], not both",
"expression" : "extension.exists() != value.exists()",
"xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Extension"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.collection.extension:einstellungBlutversorgung",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCo ed with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.",
"alias" : [
"extensions",
"user content"
],
"min" : 0,
"max" : "*",
"base" : {
"path" : "Element.extension",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Extension"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ext-1",
"severity" : "error",
"human" : "Must have either extensions or value[x], not both",
"expression" : "extension.exists() != value.exists()",
"xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Extension"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.collection.bodySite.coding",
"slicing" : {
"discriminator" : [
{
"type" : "pattern",
"path" : "$this.system"
}
],
"rules" : "open"
},
"short" : "Code defined by a terminology system",
"definition" : "A reference to a code defined by a terminology system.",
"comment" : "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.",
"requirements" : "Allows for alternative encodings within a code system, and translations to other code systems.",
"min" : 0,
"max" : "*",
"base" : {
"path" : "CodeableConcept.coding",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Coding"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "CE/CNE/CWE subset one of the sets of component 1-3 or 4-6"
},
{
"identity" : "rim",
"map" : "CV"
},
{
"identity" : "orim",
"map" : "fhir:Coding rdfs:subClassOf dt:CDCoding"
},
{
"identity" : "v2",
"map" : "C*E.1-8, C*E.10-22"
},
{
"identity" : "rim",
"map" : "union(., ./translation)"
},
{
"identity" : "orim",
"map" : "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:sct",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.collection.bodySite.coding",
"sliceName" : "sct",
"short" : "Code defined by a terminology system",
"definition" : "A reference to a code defined by a terminology system.",
"comment" : "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.",
"requirements" : "Allows for alternative encodings within a code system, and translations to other code systems.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "CodeableConcept.coding",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Coding"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mustSupport" : true,
"isSummary" : true,
"binding" : {
"strength" : "required",
"valueSet" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/ValueSet/sct-body-structures"
},
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "CE/CNE/CWE subset one of the sets of component 1-3 or 4-6"
},
{
"identity" : "rim",
"map" : "CV"
},
{
"identity" : "orim",
"map" : "fhir:Coding rdfs:subClassOf dt:CDCoding"
},
{
"identity" : "v2",
"map" : "C*E.1-8, C*E.10-22"
},
{
"identity" : "rim",
"map" : "union(., ./translation)"
},
{
"identity" : "orim",
"map" : "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:sct.id",
"path" : "Specimen.collection.bodySite.coding.id",
"representation" : [
"xmlAttr"
],
"short" : "Unique id for inter-element referencing",
"definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Element.id",
"min" : 0,
"max" : "1"
},
"type" : [
{
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type",
"valueUrl" : "string"
}
],
"code" : "http://hl7.org/fhirpath/System.String"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:sct.extension",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.collection.bodySite.coding.extension",
"slicing" : {
"discriminator" : [
{
"type" : "value",
"path" : "url"
}
],
"description" : "Extensions are always sliced by (at least) url",
"rules" : "open"
},
"short" : "Additional content defined by implementations",
"definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.",
"comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.",
"alias" : [
"extensions",
"user content"
],
"min" : 0,
"max" : "*",
"base" : {
"path" : "Element.extension",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Extension"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ext-1",
"severity" : "error",
"human" : "Must have either extensions or value[x], not both",
"expression" : "extension.exists() != value.exists()",
"xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Extension"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:sct.system",
"path" : "Specimen.collection.bodySite.coding.system",
"short" : "Identity of the terminology system",
"definition" : "The identification of the code system that defines the meaning of the symbol in the code.",
"comment" : "The URI may be an OID (urn:oid:...) or a UUID (urn:uuid:...). OIDs and UUIDs SHALL be references to the HL7 OID registry. Otherwise, the URI should come from HL7's list of FHIR defined special URIs or it should reference to some definition that establishes the system clearly and unambiguously.",
"requirements" : "Need to be unambiguous about the source of the definition of the symbol.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.system",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "uri"
}
],
"patternUri" : "http://snomed.info/sct",
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.3"
},
{
"identity" : "rim",
"map" : "./codeSystem"
},
{
"identity" : "orim",
"map" : "fhir:Coding.system rdfs:subPropertyOf dt:CDCoding.codeSystem"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:sct.version",
"path" : "Specimen.collection.bodySite.coding.version",
"short" : "Version of the system - if relevant",
"definition" : "The version of the code system which was used when choosing this code. Note that a well-maintained code system does not need the version reported, because the meaning of codes is consistent across versions. However this cannot consistently be assured, and when the meaning is not guaranteed to be consistent, the version SHOULD be exchanged.",
"comment" : "Where the terminology does not clearly define what string should be used to identify code system versions, the recommendation is to use the date (expressed in FHIR date format) on which that version was officially published as the version date.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.version",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "string"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.7"
},
{
"identity" : "rim",
"map" : "./codeSystemVersion"
},
{
"identity" : "orim",
"map" : "fhir:Coding.version rdfs:subPropertyOf dt:CDCoding.codeSystemVersion"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:sct.code",
"path" : "Specimen.collection.bodySite.coding.code",
"short" : "Symbol in syntax defined by the system",
"definition" : "A symbol in syntax defined by the system. The symbol may be a predefined code or an expression in a syntax defined by the coding system (e.g. post-coordination).",
"comment" : "Note that FHIR strings SHALL NOT exceed 1MB in size",
"requirements" : "Need to refer to a particular code in the system.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.code",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "code"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.1"
},
{
"identity" : "rim",
"map" : "./code"
},
{
"identity" : "orim",
"map" : "fhir:Coding.code rdfs:subPropertyOf dt:CDCoding.code"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:sct.display",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable",
"valueBoolean" : true
}
],
"path" : "Specimen.collection.bodySite.coding.display",
"short" : "Representation defined by the system",
"definition" : "A representation of the meaning of the code in the system, following the rules of the system.",
"comment" : "Note that FHIR strings SHALL NOT exceed 1MB in size",
"requirements" : "Need to be able to carry a human-readable meaning of the code for readers that do not know the system.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.display",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "string"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.2 - but note this is not well followed"
},
{
"identity" : "rim",
"map" : "CV.displayName"
},
{
"identity" : "orim",
"map" : "fhir:Coding.display rdfs:subPropertyOf dt:CDCoding.displayName"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:sct.userSelected",
"path" : "Specimen.collection.bodySite.coding.userSelected",
"short" : "If this coding was chosen directly by the user",
"definition" : "Indicates that this coding was chosen by a user directly - e.g. off a pick list of available items (codes or displays).",
"comment" : "Amongst a set of alternatives, a directly chosen code is the most appropriate starting point for new translations. There is some ambiguity about what exactly 'directly chosen' implies, and trading partner agreement may be needed to clarify the use of this element and its consequences more completely.",
"requirements" : "This has been identified as a clinical safety criterium - that this exact system/code pair was chosen explicitly, rather than inferred by the system based on some rules or language processing.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.userSelected",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "boolean"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "Sometimes implied by being first"
},
{
"identity" : "rim",
"map" : "CD.codingRationale"
},
{
"identity" : "orim",
"map" : "fhir:Coding.userSelected fhir:mapsTo dt:CDCoding.codingRationale. fhir:Coding.userSelected fhir:hasMap fhir:Coding.userSelected.map. fhir:Coding.userSelected.map a fhir:Map; fhir:target dt:CDCoding.codingRationale. fhir:Coding.userSelected\\#true a [ fhir:source \"true\"; fhir:target dt:CDCoding.codingRationale\\#O ]"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:icd-o-3",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.collection.bodySite.coding",
"sliceName" : "icd-o-3",
"short" : "Code defined by a terminology system",
"definition" : "A reference to a code defined by a terminology system.",
"comment" : "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.",
"requirements" : "Allows for alternative encodings within a code system, and translations to other code systems.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "CodeableConcept.coding",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Coding"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mustSupport" : true,
"isSummary" : true,
"binding" : {
"strength" : "required",
"valueSet" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/ValueSet/icd-o-3-topography"
},
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "CE/CNE/CWE subset one of the sets of component 1-3 or 4-6"
},
{
"identity" : "rim",
"map" : "CV"
},
{
"identity" : "orim",
"map" : "fhir:Coding rdfs:subClassOf dt:CDCoding"
},
{
"identity" : "v2",
"map" : "C*E.1-8, C*E.10-22"
},
{
"identity" : "rim",
"map" : "union(., ./translation)"
},
{
"identity" : "orim",
"map" : "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:icd-o-3.id",
"path" : "Specimen.collection.bodySite.coding.id",
"representation" : [
"xmlAttr"
],
"short" : "Unique id for inter-element referencing",
"definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Element.id",
"min" : 0,
"max" : "1"
},
"type" : [
{
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type",
"valueUrl" : "string"
}
],
"code" : "http://hl7.org/fhirpath/System.String"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:icd-o-3.extension",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.collection.bodySite.coding.extension",
"slicing" : {
"discriminator" : [
{
"type" : "value",
"path" : "url"
}
],
"description" : "Extensions are always sliced by (at least) url",
"rules" : "open"
},
"short" : "Additional content defined by implementations",
"definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.",
"comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.",
"alias" : [
"extensions",
"user content"
],
"min" : 0,
"max" : "*",
"base" : {
"path" : "Element.extension",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Extension"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ext-1",
"severity" : "error",
"human" : "Must have either extensions or value[x], not both",
"expression" : "extension.exists() != value.exists()",
"xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Extension"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:icd-o-3.system",
"path" : "Specimen.collection.bodySite.coding.system",
"short" : "Identity of the terminology system",
"definition" : "The identification of the code system that defines the meaning of the symbol in the code.",
"comment" : "The URI may be an OID (urn:oid:...) or a UUID (urn:uuid:...). OIDs and UUIDs SHALL be references to the HL7 OID registry. Otherwise, the URI should come from HL7's list of FHIR defined special URIs or it should reference to some definition that establishes the system clearly and unambiguously.",
"requirements" : "Need to be unambiguous about the source of the definition of the symbol.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.system",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "uri"
}
],
"patternUri" : "http://terminology.hl7.org/CodeSystem/icd-o-3",
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.3"
},
{
"identity" : "rim",
"map" : "./codeSystem"
},
{
"identity" : "orim",
"map" : "fhir:Coding.system rdfs:subPropertyOf dt:CDCoding.codeSystem"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:icd-o-3.version",
"path" : "Specimen.collection.bodySite.coding.version",
"short" : "Version of the system - if relevant",
"definition" : "The version of the code system which was used when choosing this code. Note that a well-maintained code system does not need the version reported, because the meaning of codes is consistent across versions. However this cannot consistently be assured, and when the meaning is not guaranteed to be consistent, the version SHOULD be exchanged.",
"comment" : "Where the terminology does not clearly define what string should be used to identify code system versions, the recommendation is to use the date (expressed in FHIR date format) on which that version was officially published as the version date.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.version",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "string"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.7"
},
{
"identity" : "rim",
"map" : "./codeSystemVersion"
},
{
"identity" : "orim",
"map" : "fhir:Coding.version rdfs:subPropertyOf dt:CDCoding.codeSystemVersion"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:icd-o-3.code",
"path" : "Specimen.collection.bodySite.coding.code",
"short" : "Symbol in syntax defined by the system",
"definition" : "A symbol in syntax defined by the system. The symbol may be a predefined code or an expression in a syntax defined by the coding system (e.g. post-coordination).",
"comment" : "Note that FHIR strings SHALL NOT exceed 1MB in size",
"requirements" : "Need to refer to a particular code in the system.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.code",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "code"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.1"
},
{
"identity" : "rim",
"map" : "./code"
},
{
"identity" : "orim",
"map" : "fhir:Coding.code rdfs:subPropertyOf dt:CDCoding.code"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:icd-o-3.display",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable",
"valueBoolean" : true
}
],
"path" : "Specimen.collection.bodySite.coding.display",
"short" : "Representation defined by the system",
"definition" : "A representation of the meaning of the code in the system, following the rules of the system.",
"comment" : "Note that FHIR strings SHALL NOT exceed 1MB in size",
"requirements" : "Need to be able to carry a human-readable meaning of the code for readers that do not know the system.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.display",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "string"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.2 - but note this is not well followed"
},
{
"identity" : "rim",
"map" : "CV.displayName"
},
{
"identity" : "orim",
"map" : "fhir:Coding.display rdfs:subPropertyOf dt:CDCoding.displayName"
}
]
},
{
"id" : "Specimen.collection.bodySite.coding:icd-o-3.userSelected",
"path" : "Specimen.collection.bodySite.coding.userSelected",
"short" : "If this coding was chosen directly by the user",
"definition" : "Indicates that this coding was chosen by a user directly - e.g. off a pick list of available items (codes or displays).",
"comment" : "Amongst a set of alternatives, a directly chosen code is the most appropriate starting point for new translations. There is some ambiguity about what exactly 'directly chosen' implies, and trading partner agreement may be needed to clarify the use of this element and its consequences more completely.",
"requirements" : "This has been identified as a clinical safety criterium - that this exact system/code pair was chosen explicitly, rather than inferred by the system based on some rules or language processing.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.userSelected",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "boolean"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "Sometimes implied by being first"
},
{
"identity" : "rim",
"map" : "CD.codingRationale"
},
{
"identity" : "orim",
"map" : "fhir:Coding.userSelected fhir:mapsTo dt:CDCoding.codingRationale. fhir:Coding.userSelected fhir:hasMap fhir:Coding.userSelected.map. fhir:Coding.userSelected.map a fhir:Map; fhir:target dt:CDCoding.codingRationale. fhir:Coding.userSelected\\#true a [ fhir:source \"true\"; fhir:target dt:CDCoding.codingRationale\\#O ]"
}
]
},
{
"id" : "Specimen.collection.bodySite.text",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable",
"valueBoolean" : true
}
],
"path" : "Specimen.collection.bodySite.text",
"short" : "Plain text representation of the concept",
"definition" : "A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.",
"comment" : "Very often the text is the same as a displayName of one of the codings.",
"requirements" : "The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "CodeableConcept.text",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "string"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.9. But note many systems use C*E.2 for this"
},
{
"identity" : "rim",
"map" : "./originalText[mediaType/code=\"text/plain\"]/data"
},
{
"identity" : "orim",
"map" : "fhir:CodeableConcept.text rdfs:subPropertyOf dt:CD.originalText"
}
]
},
{
"id" : "Specimen.collection.fastingStatus[x]",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.collection.fastingStatus[x]",
"slicing" : {
"discriminator" : [
{
"type" : "type",
"path" : "$this"
}
],
"ordered" : false,
"rules" : "open"
},
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Nüchternstatus"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Fasting status"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Der Nüchternstatus der Person zum Zeitpunkt der Probenentnahme."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The fasting status of the person at the time the specimen was collected."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"comment" : "Representing fasting status using this element is preferred to representing it with an observation using a 'pre-coordinated code' such as LOINC 2005-7 (Calcium [Moles/​time] in 2 hour Urine --12 hours fasting), or using a component observation ` such as `Observation.component code` = LOINC 49541-6 (Fasting status - Reported).",
"requirements" : "Many diagnostic tests require fasting to facilitate accurate interpretation.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Specimen.collection.fastingStatus[x]",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "CodeableConcept"
},
{
"code" : "Duration"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mustSupport" : true,
"isSummary" : true,
"binding" : {
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName",
"valueString" : "FastingStatus"
}
],
"strength" : "extensible",
"description" : "Codes describing the fasting status of the patient.",
"valueSet" : "http://terminology.hl7.org/ValueSet/v2-0916"
},
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "OBR-"
}
]
},
{
"id" : "Specimen.collection.fastingStatus[x]:fastingStatusCodeableConcept",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.collection.fastingStatus[x]",
"sliceName" : "fastingStatusCodeableConcept",
"short" : "Whether or how long patient abstained from food and/or drink",
"definition" : "Abstinence or reduction from some or all food, drink, or both, for a period of time prior to sample collection.",
"comment" : "Representing fasting status using this element is preferred to representing it with an observation using a 'pre-coordinated code' such as LOINC 2005-7 (Calcium [Moles/​time] in 2 hour Urine --12 hours fasting), or using a component observation ` such as `Observation.component code` = LOINC 49541-6 (Fasting status - Reported).",
"requirements" : "Many diagnostic tests require fasting to facilitate accurate interpretation.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Specimen.collection.fastingStatus[x]",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "CodeableConcept"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"binding" : {
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName",
"valueString" : "FastingStatus"
}
],
"strength" : "required",
"description" : "Codes describing the fasting status of the patient.",
"valueSet" : "http://terminology.hl7.org/ValueSet/v2-0916"
},
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "OBR-"
}
]
},
{
"id" : "Specimen.processing",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.processing",
"slicing" : {
"discriminator" : [
{
"type" : "pattern",
"path" : "$this.procedure.coding"
}
],
"rules" : "open"
},
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Probenverarbeitung"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Specimen processing"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Details zur Verarbeitung der Probe, einschließlich Prozeduren und Verarbeitungszeitraum."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Details about the processing of the specimen, including procedures and processing period."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"min" : 0,
"max" : "*",
"base" : {
"path" : "Specimen.processing",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "BackboneElement"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mustSupport" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : ".participation[typeCode=SBJ].act[code=SPCTRT, moodCode=EVN]"
}
]
},
{
"id" : "Specimen.processing.id",
"path" : "Specimen.processing.id",
"representation" : [
"xmlAttr"
],
"short" : "Unique id for inter-element referencing",
"definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Element.id",
"min" : 0,
"max" : "1"
},
"type" : [
{
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type",
"valueUrl" : "string"
}
],
"code" : "http://hl7.org/fhirpath/System.String"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
}
]
},
{
"id" : "Specimen.processing.extension",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.processing.extension",
"slicing" : {
"discriminator" : [
{
"type" : "value",
"path" : "url"
}
],
"description" : "Extensions are always sliced by (at least) url",
"ordered" : false,
"rules" : "open"
},
"short" : "Additional content defined by implementations",
"definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.",
"comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.",
"alias" : [
"extensions",
"user content"
],
"min" : 1,
"max" : "*",
"base" : {
"path" : "Element.extension",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Extension"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ext-1",
"severity" : "error",
"human" : "Must have either extensions or value[x], not both",
"expression" : "extension.exists() != value.exists()",
"xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Extension"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.processing.extension:temperaturbedingungen",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.processing.extension",
"sliceName" : "temperaturbedingungen",
"short" : "Extension - Temperaturbedingungen",
"definition" : "Um zu einer Verabeitung oder Lagerung die jeweils herrschenden Temperaturbedingungen (in °C) anzugeben soll diese Extension verwendet werden. Dabei soll nach Möglichkeit immer ein Wertebereich inkl. oberer und unterer Grenze angegeben werden.",
"comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.",
"alias" : [
"extensions",
"user content"
],
"min" : 1,
"max" : "1",
"base" : {
"path" : "Element.extension",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Extension",
"profile" : [
"https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Temperaturbedingungen"
]
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ext-1",
"severity" : "error",
"human" : "Must have either extensions or value[x], not both",
"expression" : "extension.exists() != value.exists()",
"xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Extension"
}
],
"mustSupport" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.processing.modifierExtension",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.processing.modifierExtension",
"short" : "Extensions that cannot be ignored even if unrecognized",
"definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).",
"comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.",
"requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](extensibility.html#modifierExtension).",
"alias" : [
"extensions",
"user content",
"modifiers"
],
"min" : 0,
"max" : "*",
"base" : {
"path" : "BackboneElement.modifierExtension",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Extension"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ext-1",
"severity" : "error",
"human" : "Must have either extensions or value[x], not both",
"expression" : "extension.exists() != value.exists()",
"xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Extension"
}
],
"isModifier" : true,
"isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them",
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.processing.description",
"path" : "Specimen.processing.description",
"short" : "Textual description of procedure",
"definition" : "Textual description of procedure.",
"comment" : "Note that FHIR strings SHALL NOT exceed 1MB in size",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Specimen.processing.description",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "string"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : ".text"
}
]
},
{
"id" : "Specimen.processing.procedure",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.processing.procedure",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Verarbeitungstyp"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Processing procedure"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Die angewendete Prozedur zur Verarbeitung der Probe, z.B. Zentrifugation."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The procedure applied to process the specimen, e.g. centrifugation."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"comment" : "Not all terminology uses fit this general pattern. In some cases, models should not use CodeableConcept and use Coding directly and provide their own structure for managing text, codings, translations and the relationship between elements and pre- and post-coordination.",
"min" : 1,
"max" : "1",
"base" : {
"path" : "Specimen.processing.procedure",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "CodeableConcept"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mustSupport" : true,
"binding" : {
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName",
"valueString" : "SpecimenProcessingProcedure"
}
],
"strength" : "example",
"description" : "Type indicating the technique used to process the specimen.",
"valueSet" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/ValueSet/sct-lab-procedure"
},
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "CE/CNE/CWE"
},
{
"identity" : "rim",
"map" : "CD"
},
{
"identity" : "orim",
"map" : "fhir:CodeableConcept rdfs:subClassOf dt:CD"
},
{
"identity" : "rim",
"map" : ".code"
}
]
},
{
"id" : "Specimen.processing.procedure.id",
"path" : "Specimen.processing.procedure.id",
"representation" : [
"xmlAttr"
],
"short" : "Unique id for inter-element referencing",
"definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Element.id",
"min" : 0,
"max" : "1"
},
"type" : [
{
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type",
"valueUrl" : "string"
}
],
"code" : "http://hl7.org/fhirpath/System.String"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
}
]
},
{
"id" : "Specimen.processing.procedure.extension",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.processing.procedure.extension",
"slicing" : {
"discriminator" : [
{
"type" : "value",
"path" : "url"
}
],
"description" : "Extensions are always sliced by (at least) url",
"rules" : "open"
},
"short" : "Additional content defined by implementations",
"definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.",
"comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.",
"alias" : [
"extensions",
"user content"
],
"min" : 0,
"max" : "*",
"base" : {
"path" : "Element.extension",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Extension"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ext-1",
"severity" : "error",
"human" : "Must have either extensions or value[x], not both",
"expression" : "extension.exists() != value.exists()",
"xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Extension"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.processing.procedure.coding",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.processing.procedure.coding",
"slicing" : {
"discriminator" : [
{
"type" : "pattern",
"path" : "$this.system"
}
],
"rules" : "open"
},
"short" : "Code defined by a terminology system",
"definition" : "A reference to a code defined by a terminology system.",
"comment" : "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.",
"requirements" : "Allows for alternative encodings within a code system, and translations to other code systems.",
"min" : 1,
"max" : "*",
"base" : {
"path" : "CodeableConcept.coding",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Coding"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "CE/CNE/CWE subset one of the sets of component 1-3 or 4-6"
},
{
"identity" : "rim",
"map" : "CV"
},
{
"identity" : "orim",
"map" : "fhir:Coding rdfs:subClassOf dt:CDCoding"
},
{
"identity" : "v2",
"map" : "C*E.1-8, C*E.10-22"
},
{
"identity" : "rim",
"map" : "union(., ./translation)"
},
{
"identity" : "orim",
"map" : "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding"
}
]
},
{
"id" : "Specimen.processing.procedure.coding:sct",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.processing.procedure.coding",
"sliceName" : "sct",
"short" : "Code defined by a terminology system",
"definition" : "A reference to a code defined by a terminology system.",
"comment" : "Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.",
"requirements" : "Allows for alternative encodings within a code system, and translations to other code systems.",
"min" : 1,
"max" : "*",
"base" : {
"path" : "CodeableConcept.coding",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Coding"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mustSupport" : true,
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "CE/CNE/CWE subset one of the sets of component 1-3 or 4-6"
},
{
"identity" : "rim",
"map" : "CV"
},
{
"identity" : "orim",
"map" : "fhir:Coding rdfs:subClassOf dt:CDCoding"
},
{
"identity" : "v2",
"map" : "C*E.1-8, C*E.10-22"
},
{
"identity" : "rim",
"map" : "union(., ./translation)"
},
{
"identity" : "orim",
"map" : "fhir:CodeableConcept.coding rdfs:subPropertyOf dt:CD.coding"
}
]
},
{
"id" : "Specimen.processing.procedure.coding:sct.id",
"path" : "Specimen.processing.procedure.coding.id",
"representation" : [
"xmlAttr"
],
"short" : "Unique id for inter-element referencing",
"definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Element.id",
"min" : 0,
"max" : "1"
},
"type" : [
{
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type",
"valueUrl" : "string"
}
],
"code" : "http://hl7.org/fhirpath/System.String"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
}
]
},
{
"id" : "Specimen.processing.procedure.coding:sct.extension",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.processing.procedure.coding.extension",
"slicing" : {
"discriminator" : [
{
"type" : "value",
"path" : "url"
}
],
"description" : "Extensions are always sliced by (at least) url",
"rules" : "open"
},
"short" : "Additional content defined by implementations",
"definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.",
"comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.",
"alias" : [
"extensions",
"user content"
],
"min" : 0,
"max" : "*",
"base" : {
"path" : "Element.extension",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Extension"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "ext-1",
"severity" : "error",
"human" : "Must have either extensions or value[x], not both",
"expression" : "extension.exists() != value.exists()",
"xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])",
"source" : "http://hl7.org/fhir/StructureDefinition/Extension"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "rim",
"map" : "N/A"
}
]
},
{
"id" : "Specimen.processing.procedure.coding:sct.system",
"path" : "Specimen.processing.procedure.coding.system",
"short" : "Identity of the terminology system",
"definition" : "The identification of the code system that defines the meaning of the symbol in the code.",
"comment" : "The URI may be an OID (urn:oid:...) or a UUID (urn:uuid:...). OIDs and UUIDs SHALL be references to the HL7 OID registry. Otherwise, the URI should come from HL7's list of FHIR defined special URIs or it should reference to some definition that establishes the system clearly and unambiguously.",
"requirements" : "Need to be unambiguous about the source of the definition of the symbol.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.system",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "uri"
}
],
"patternUri" : "http://snomed.info/sct",
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.3"
},
{
"identity" : "rim",
"map" : "./codeSystem"
},
{
"identity" : "orim",
"map" : "fhir:Coding.system rdfs:subPropertyOf dt:CDCoding.codeSystem"
}
]
},
{
"id" : "Specimen.processing.procedure.coding:sct.version",
"path" : "Specimen.processing.procedure.coding.version",
"short" : "Version of the system - if relevant",
"definition" : "The version of the code system which was used when choosing this code. Note that a well-maintained code system does not need the version reported, because the meaning of codes is consistent across versions. However this cannot consistently be assured, and when the meaning is not guaranteed to be consistent, the version SHOULD be exchanged.",
"comment" : "Where the terminology does not clearly define what string should be used to identify code system versions, the recommendation is to use the date (expressed in FHIR date format) on which that version was officially published as the version date.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.version",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "string"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.7"
},
{
"identity" : "rim",
"map" : "./codeSystemVersion"
},
{
"identity" : "orim",
"map" : "fhir:Coding.version rdfs:subPropertyOf dt:CDCoding.codeSystemVersion"
}
]
},
{
"id" : "Specimen.processing.procedure.coding:sct.code",
"path" : "Specimen.processing.procedure.coding.code",
"short" : "Symbol in syntax defined by the system",
"definition" : "A symbol in syntax defined by the system. The symbol may be a predefined code or an expression in a syntax defined by the coding system (e.g. post-coordination).",
"comment" : "Note that FHIR strings SHALL NOT exceed 1MB in size",
"requirements" : "Need to refer to a particular code in the system.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.code",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "code"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.1"
},
{
"identity" : "rim",
"map" : "./code"
},
{
"identity" : "orim",
"map" : "fhir:Coding.code rdfs:subPropertyOf dt:CDCoding.code"
}
]
},
{
"id" : "Specimen.processing.procedure.coding:sct.display",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable",
"valueBoolean" : true
}
],
"path" : "Specimen.processing.procedure.coding.display",
"short" : "Representation defined by the system",
"definition" : "A representation of the meaning of the code in the system, following the rules of the system.",
"comment" : "Note that FHIR strings SHALL NOT exceed 1MB in size",
"requirements" : "Need to be able to carry a human-readable meaning of the code for readers that do not know the system.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.display",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "string"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.2 - but note this is not well followed"
},
{
"identity" : "rim",
"map" : "CV.displayName"
},
{
"identity" : "orim",
"map" : "fhir:Coding.display rdfs:subPropertyOf dt:CDCoding.displayName"
}
]
},
{
"id" : "Specimen.processing.procedure.coding:sct.userSelected",
"path" : "Specimen.processing.procedure.coding.userSelected",
"short" : "If this coding was chosen directly by the user",
"definition" : "Indicates that this coding was chosen by a user directly - e.g. off a pick list of available items (codes or displays).",
"comment" : "Amongst a set of alternatives, a directly chosen code is the most appropriate starting point for new translations. There is some ambiguity about what exactly 'directly chosen' implies, and trading partner agreement may be needed to clarify the use of this element and its consequences more completely.",
"requirements" : "This has been identified as a clinical safety criterium - that this exact system/code pair was chosen explicitly, rather than inferred by the system based on some rules or language processing.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Coding.userSelected",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "boolean"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "Sometimes implied by being first"
},
{
"identity" : "rim",
"map" : "CD.codingRationale"
},
{
"identity" : "orim",
"map" : "fhir:Coding.userSelected fhir:mapsTo dt:CDCoding.codingRationale. fhir:Coding.userSelected fhir:hasMap fhir:Coding.userSelected.map. fhir:Coding.userSelected.map a fhir:Map; fhir:target dt:CDCoding.codingRationale. fhir:Coding.userSelected\\#true a [ fhir:source \"true\"; fhir:target dt:CDCoding.codingRationale\\#O ]"
}
]
},
{
"id" : "Specimen.processing.procedure.text",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-translatable",
"valueBoolean" : true
}
],
"path" : "Specimen.processing.procedure.text",
"short" : "Plain text representation of the concept",
"definition" : "A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.",
"comment" : "Very often the text is the same as a displayName of one of the codings.",
"requirements" : "The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "CodeableConcept.text",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "string"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "C*E.9. But note many systems use C*E.2 for this"
},
{
"identity" : "rim",
"map" : "./originalText[mediaType/code=\"text/plain\"]/data"
},
{
"identity" : "orim",
"map" : "fhir:CodeableConcept.text rdfs:subPropertyOf dt:CD.originalText"
}
]
},
{
"id" : "Specimen.processing.additive",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.processing.additive",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Additive bei Verarbeitung"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Processing additives"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Zusatzstoffe, die während der Probenverarbeitung verwendet wurden, z.B. Fixierungsmittel."
}
],
&n ntent",
"valueString" : "Containertyp"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Container type"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Der Typ des Probencontainers, der für diese Probe verwendet wurde."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The type of container used for this specimen."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"comment" : "Not all terminology uses fit this general pattern. In some cases, models should not use CodeableConcept and use Coding directly and provide their own structure for managing text, codings, translations and the relationship between elements and pre- and post-coordination.",
"min" : 1,
"max" : "1",
"base" : {
"path" : "Specimen.container.type",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "CodeableConcept"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mustSupport" : true,
"binding" : {
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName",
"valueString" : "SpecimenContainerType"
}
],
"strength" : "extensible",
"description" : "Type of specimen container.",
"valueSet" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/ValueSet/containertyp"
},
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "CE/CNE/CWE"
},
{
"identity" : "rim",
"map" : "CD"
},
{
"identity" : "orim",
"map" : "fhir:CodeableConcept rdfs:subClassOf dt:CD"
},
{
"identity" : "v2",
"map" : "SPM-27"
},
{
"identity" : "rim",
"map" : ".code"
}
]
},
{
"id" : "Specimen.container.capacity",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.container.capacity",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Containerkapazität"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Capacity"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Die maximale Kapazität des Containers, der für die Probe verwendet wurde."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The maximum capacity of the container used for the specimen."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"comment" : "The context of use may frequently define what kind of quantity this is and therefore what kind of units can be used. The context of use may also restrict the values for the comparator.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Specimen.container.capacity",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "Quantity",
"profile" : [
"http://hl7.org/fhir/StructureDefinition/SimpleQuantity"
]
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "qty-3",
"severity" : "error",
"human" : "If a code for the unit is present, the system SHALL also be present",
"expression" : "code.empty() or system.exists()",
"xpath" : "not(exists(f:code)) or exists(f:system)",
"source" : "http://hl7.org/fhir/StructureDefinition/Quantity"
},
{
"key" : "sqty-1",
"severity" : "error",
"human" : "The comparator is not used on a SimpleQuantity",
"expression" : "comparator.empty()",
"xpath" : "not(exists(f:comparator))",
"source" : "http://hl7.org/fhir/StructureDefinition/SimpleQuantity"
}
],
"mustSupport" : true,
"isModifier" : false,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "SN (see also Range) or CQ"
},
{
"identity" : "rim",
"map" : "PQ, IVL<PQ>, MO, CO, depending on the values"
},
{
"identity" : "v2",
"map" : "one of: SAC 16, SAC17 and SAC 20, or SAC 21 and SAC 20"
},
{
"identity" : "rim",
"map" : ".quantity"
}
]
},
{
"id" : "Specimen.container.specimenQuantity",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.container.specimenQuantity",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Probenmenge"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Specimen quantity"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Die Menge des gesammelten Materials."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The amount of material collected."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"comment" : "The context of use may frequently define what kind of quantity this is and therefore what kind of units can be used. The context of use may also restrict the values for the comparator.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Specimen.container.specimenQuantity",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "Quantity",
"profile" : [
"http://hl7.org/fhir/StructureDefinition/SimpleQuantity"
]
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
},
{
"key" : "qty-3",
"severity" : "error",
"human" : "If a code for the unit is present, the system SHALL also be present",
"expression" : "code.empty() or system.exists()",
"xpath" : "not(exists(f:code)) or exists(f:system)",
"source" : "http://hl7.org/fhir/StructureDefinition/Quantity"
},
{
"key" : "sqty-1",
"severity" : "error",
"human" : "The comparator is not used on a SimpleQuantity",
"expression" : "comparator.empty()",
"xpath" : "not(exists(f:comparator))",
"source" : "http://hl7.org/fhir/StructureDefinition/SimpleQuantity"
}
],
"mustSupport" : true,
"isModifier" : false,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "SN (see also Range) or CQ"
},
{
"identity" : "rim",
"map" : "PQ, IVL<PQ>, MO, CO, depending on the values"
},
{
"identity" : "v2",
"map" : "SAC-23 (value) SAC-24 (units"
},
{
"identity" : "rim",
"map" : ".playedRole[classCode=CONT].quantity"
}
]
},
{
"id" : "Specimen.container.additive[x]",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.container.additive[x]",
"slicing" : {
"discriminator" : [
{
"type" : "type",
"path" : "$this"
}
],
"ordered" : false,
"rules" : "open"
},
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Additiv"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Additives"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Zusatzstoffe, die im Probenbehälter enthalten sind z.B. wie Konservierungsmittel."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Additives contained in the specimen container e.g. preservatives."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"min" : 0,
"max" : "1",
"base" : {
"path" : "Specimen.container.additive[x]",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "CodeableConcept"
},
{
"code" : "Reference",
"targetProfile" : [
"http://hl7.org/fhir/StructureDefinition/Substance"
]
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mustSupport" : true,
"binding" : {
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName",
"valueString" : "SpecimenContainerAdditive"
}
],
"strength" : "example",
"description" : "Substance added to specimen container.",
"valueSet" : "http://terminology.hl7.org/ValueSet/v2-0371"
},
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "SAC-27"
},
{
"identity" : "rim",
"map" : ".scopesRole[classCode=ADTV].player"
}
]
},
{
"id" : "Specimen.container.additive[x]:additiveReference",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.container.additive[x]",
"sliceName" : "additiveReference",
"short" : "Additive associated with container",
"definition" : "Introduced substance to preserve, maintain or enhance the specimen. Examples: Formalin, Citrate, EDTA.",
"min" : 0,
"max" : "1",
"base" : {
"path" : "Specimen.container.additive[x]",
"min" : 0,
"max" : "1"
},
"type" : [
{
"code" : "Reference",
"targetProfile" : [
"https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Substance"
]
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "SAC-27"
},
{
"identity" : "rim",
"map" : ".scopesRole[classCode=ADTV].player"
}
]
},
{
"id" : "Specimen.condition",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.condition",
"short" : "State of the specimen",
"definition" : "A mode or state of being that describes the nature of the specimen.",
"comment" : "Specimen condition is an observation made about the specimen. It's a point-in-time assessment. It can be used to assess its quality or appropriateness for a specific test.",
"requirements" : "The specimen condition can be used to assess its quality or appropriateness for a specific test.",
"min" : 0,
"max" : "*",
"base" : {
"path" : "Specimen.condition",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "CodeableConcept"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"isSummary" : true,
"binding" : {
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/elementdefinition-bindingName",
"valueString" : "SpecimenCondition"
}
],
"strength" : "extensible",
"description" : "Codes describing the state of the specimen.",
"valueSet" : "http://terminology.hl7.org/ValueSet/v2-0493"
},
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "CE/CNE/CWE"
},
{
"identity" : "rim",
"map" : "CD"
},
{
"identity" : "orim",
"map" : "fhir:CodeableConcept rdfs:subClassOf dt:CD"
},
{
"identity" : "v2",
"map" : "SPM-24"
}
]
},
{
"id" : "Specimen.note",
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "normative"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version",
"valueCode" : "4.0.0"
}
],
"path" : "Specimen.note",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Projektnutzung"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Project usage"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Freitextangabe zur Verwendung der Probe in spezifischen Projekten."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Free-text information about the use of the specimen in specific projects."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"comment" : "For systems that do not have structured annotations, they can simply communicate a single annotation with no author or time. This element may need to be included in narrative because of the potential for modifying information. *Annotations SHOULD NOT* be used to communicate \"modifying\" information that could be computable. (This is a SHOULD because enforcing user behavior is nearly impossible).",
"min" : 0,
"max" : "*",
"base" : {
"path" : "Specimen.note",
"min" : 0,
"max" : "*"
},
"type" : [
{
"code" : "Annotation"
}
],
"condition" : [
"ele-1"
],
"constraint" : [
{
"key" : "ele-1",
"severity" : "error",
"human" : "All FHIR elements must have a @value or children",
"expression" : "hasValue() or (children().count() > id.count())",
"xpath" : "@value|f:*|h:div",
"source" : "http://hl7.org/fhir/StructureDefinition/Element"
}
],
"mustSupport" : true,
"mapping" : [
{
"identity" : "rim",
"map" : "n/a"
},
{
"identity" : "v2",
"map" : "N/A"
},
{
"identity" : "rim",
"map" : "Act"
},
{
"identity" : "v2",
"map" : "OBX"
},
{
"identity" : "rim",
"map" : ".inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"annotation\"].value"
}
]
}
]
},
"differential" : {
"element" : [
{
"id" : "Specimen.identifier",
"path" : "Specimen.identifier",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Proben-ID"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Specimen ID"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Einrichtungsinterner Identifier der Probe."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Internal identifier of the specimen at the institution."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"mustSupport" : true
},
{
"id" : "Specimen.status",
"path" : "Specimen.status",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Verfügbarkeitsstatus"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Availability status"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Der Status der Probe in Bezug auf die Verfügbarkeit für Forschung."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The status of the specimen in terms of its availability for research."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"min" : 1,
"mustSupport" : true
},
{
"id" : "Specimen.type",
"path" : "Specimen.type",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Probenart"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Specimen type"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Die Art der Probe, codiert in SNOMED CT."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The type of the specimen, encoded as SNOMED CT code."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"min" : 1,
"mustSupport" : true
},
{
"id" : "Specimen.type.coding",
"path" : "Specimen.type.coding",
"slicing" : {
"discriminator" : [
{
"type" : "pattern",
"path" : "$this.system"
}
],
"rules" : "open"
},
"min" : 1
},
{
"id" : "Specimen.type.coding:sct",
"path" : "Specimen.type.coding",
"sliceName" : "sct",
"min" : 1,
"max" : "*",
"binding" : {
"strength" : "extensible",
"valueSet" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/ValueSet/probenart"
}
},
{
"id" : "Specimen.type.coding:sct.system",
"path" : "Specimen.type.coding.system",
"patternUri" : "http://snomed.info/sct"
},
{
"id" : "Specimen.subject",
"path" : "Specimen.subject",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Patient:in"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Patient"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Verweis auf die Person, von der die Probe stammt."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Reference to the person from whom the specimen was collected."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"min" : 1,
"type" : [
{
"code" : "Reference",
"targetProfile" : [
"http://hl7.org/fhir/StructureDefinition/Patient"
]
}
],
"mustSupport" : true
},
{
"id" : "Specimen.parent",
"path" : "Specimen.parent",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Ist gewonnen aus"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Derived from"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Referenz auf eine übergeordnete Probe, aus der diese Probe gewonnen wurde."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Reference to a parent specimen from which this specimen was derived."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"mustSupport" : true
},
{
"id" : "Specimen.request",
"path" : "Specimen.request",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Entnahme-ID"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Collection ID"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Der Identifier der Probenentnahme."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The identifier for the specimen collection."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"mustSupport" : true
},
{
"id" : "Specimen.collection",
"path" : "Specimen.collection",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Probenentnahme"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Specimen sampling"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Informationen über den Prozess der Probenentnahme, einschließlich Entnahmezeitpunkt und -stelle."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Information about the specimen collection process, including collection time and site."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"min" : 1,
"mustSupport" : true
},
{
"id" : "Specimen.collection.extension",
"path" : "Specimen.collection.extension",
"slicing" : {
"discriminator" : [
{
"type" : "value",
"path" : "url"
}
],
"ordered" : false,
"rules" : "open"
}
},
{
"id" : "Specimen.collection.extension:einstellungBlutversorgung",
"path" : "Specimen.collection.extension",
"sliceName" : "einstellungBlutversorgung",
"min" : 0,
"max" : "1",
"type" : [
{
"code" : "Extension",
"profile" : [
"https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/EinstellungBlutversorgung"
]
}
],
"mustSupport" : true
},
{
"id" : "Specimen.collection.collected[x]",
"path" : "Specimen.collection.collected[x]",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Entnahmezeitpunkt"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Sampling time"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Der Zeitpunkt, zu dem die Probe entnommen oder gesammelt wurde."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The time when the specimen was collected or obtained."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"min" : 1,
"mustSupport" : true
},
{
"id" : "Specimen.collection.bodySite",
"path" : "Specimen.collection.bodySite",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Anatomische Lokalisation"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "anatomical localisation"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Die Körperstelle, von der die Probe entnommen wurde gemäß icd-o-3."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The body site from which the specimen was collected according to icd-o-3."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"constraint" : [
{
"key" : "mii-bb-1",
"severity" : "error",
"human" : "Bei der Angabe der Entnahmestelle muss ein ICD-O-3 Topographiecode oder ein SNOMED CT Code angegeben werden.",
"expression" : "coding.where(system = 'http://snomed.info/sct' or system = 'http://terminology.hl7.org/CodeSystem/icd-o-3').exists()",
"source" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/SpecimenCore"
}
],
"mustSupport" : true
},
{
"id" : "Specimen.collection.bodySite.coding",
"path" : "Specimen.collection.bodySite.coding",
"slicing" : {
"discriminator" : [
{
"type" : "pattern",
"path" : "$this.system"
}
],
"rules" : "open"
}
},
{
"id" : "Specimen.collection.bodySite.coding:sct",
"path" : "Specimen.collection.bodySite.coding",
"sliceName" : "sct",
"min" : 0,
"max" : "1",
"mustSupport" : true,
"binding" : {
"strength" : "required",
"valueSet" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/ValueSet/sct-body-structures"
}
},
{
"id" : "Specimen.collection.bodySite.coding:sct.system",
"path" : "Specimen.collection.bodySite.coding.system",
"patternUri" : "http://snomed.info/sct"
},
{
"id" : "Specimen.collection.bodySite.coding:icd-o-3",
"path" : "Specimen.collection.bodySite.coding",
"sliceName" : "icd-o-3",
"min" : 0,
"max" : "1",
"mustSupport" : true,
"binding" : {
"strength" : "required",
"valueSet" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/ValueSet/icd-o-3-topography"
}
},
{
"id" : "Specimen.collection.bodySite.coding:icd-o-3.system",
"path" : "Specimen.collection.bodySite.coding.system",
"patternUri" : "http://terminology.hl7.org/CodeSystem/icd-o-3"
},
{
"id" : "Specimen.collection.fastingStatus[x]",
"path" : "Specimen.collection.fastingStatus[x]",
"slicing" : {
"discriminator" : [
{
"type" : "type",
"path" : "$this"
}
],
"ordered" : false,
"rules" : "open"
},
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Nüchternstatus"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Fasting status"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Der Nüchternstatus der Person zum Zeitpunkt der Probenentnahme."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The fasting status of the person at the time the specimen was collected."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"mustSupport" : true
},
{
"id" : "Specimen.collection.fastingStatus[x]:fastingStatusCodeableConcept",
"path" : "Specimen.collection.fastingStatus[x]",
"sliceName" : "fastingStatusCodeableConcept",
"min" : 0,
"max" : "1",
"type" : [
{
"code" : "CodeableConcept"
}
],
"binding" : {
"strength" : "required",
"valueSet" : "http://terminology.hl7.org/ValueSet/v2-0916"
}
},
{
"id" : "Specimen.processing",
"path" : "Specimen.processing",
"slicing" : {
"discriminator" : [
{
"type" : "pattern",
"path" : "$this.procedure.coding"
}
],
"rules" : "open"
},
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Probenverarbeitung"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Specimen processing"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Details zur Verarbeitung der Probe, einschließlich Prozeduren und Verarbeitungszeitraum."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Details about the processing of the specimen, including procedures and processing period."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"mustSupport" : true
},
{
"id" : "Specimen.processing.extension",
"path" : "Specimen.processing.extension",
"slicing" : {
"discriminator" : [
{
"type" : "value",
"path" : "url"
}
],
"ordered" : false,
"rules" : "open"
},
"min" : 1
},
{
"id" : "Specimen.processing.extension:temperaturbedingungen",
"path" : "Specimen.processing.extension",
"sliceName" : "temperaturbedingungen",
"min" : 1,
"max" : "1",
"type" : [
{
"code" : "Extension",
"profile" : [
"https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Temperaturbedingungen"
]
}
],
"mustSupport" : true
},
{
"id" : "Specimen.processing.procedure",
"path" : "Specimen.processing.procedure",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Verarbeitungstyp"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Processing procedure"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Die angewendete Prozedur zur Verarbeitung der Probe, z.B. Zentrifugation."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The procedure applied to process the specimen, e.g. centrifugation."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"min" : 1,
"mustSupport" : true,
"binding" : {
"strength" : "example",
"valueSet" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/ValueSet/sct-lab-procedure"
}
},
{
"id" : "Specimen.processing.procedure.coding",
"path" : "Specimen.processing.procedure.coding",
"slicing" : {
"discriminator" : [
{
"type" : "pattern",
"path" : "$this.system"
}
],
"rules" : "open"
},
"min" : 1
},
{
"id" : "Specimen.processing.procedure.coding:sct",
"path" : "Specimen.processing.procedure.coding",
"sliceName" : "sct",
"min" : 1,
"max" : "*",
"mustSupport" : true
},
{
"id" : "Specimen.processing.procedure.coding:sct.system",
"path" : "Specimen.processing.procedure.coding.system",
"patternUri" : "http://snomed.info/sct"
},
{
"id" : "Specimen.processing.additive",
"path" : "Specimen.processing.additive",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Additive bei Verarbeitung"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Processing additives"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Zusatzstoffe, die während der Probenverarbeitung verwendet wurden, z.B. Fixierungsmittel."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Additives used during the specimen processing, e.g. fixatives."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"type" : [
{
"code" : "Reference",
"targetProfile" : [
"https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Substance"
]
}
],
"mustSupport" : true
},
{
"id" : "Specimen.processing.time[x]",
"path" : "Specimen.processing.time[x]",
"slicing" : {
"discriminator" : [
{
"type" : "type",
"path" : "$this"
}
],
"ordered" : false,
"rules" : "open"
},
"mustSupport" : true
},
{
"id" : "Specimen.processing.time[x]:timePeriod",
"path" : "Specimen.processing.time[x]",
"sliceName" : "timePeriod",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Verarbeitungszeitraum"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Processing period"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Der Zeitraum, in dem die Probe verarbeitet wurde."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The time period during which the specimen was processed."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"min" : 0,
"max" : "1",
"type" : [
{
"code" : "Period"
}
],
"mustSupport" : true
},
{
"id" : "Specimen.processing.time[x]:timePeriod.start",
"path" : "Specimen.processing.time[x].start",
"mustSupport" : true
},
{
"id" : "Specimen.processing.time[x]:timePeriod.end",
"path" : "Specimen.processing.time[x].end",
"mustSupport" : true
},
{
"id" : "Specimen.processing:lagerprozess",
"path" : "Specimen.processing",
"sliceName" : "lagerprozess",
"min" : 0,
"max" : "*",
"mustSupport" : true
},
{
"id" : "Specimen.processing:lagerprozess.extension:temperaturbedingungen",
"path" : "Specimen.processing.extension",
"sliceName" : "temperaturbedingungen",
"min" : 1,
"max" : "1",
"type" : [
{
"code" : "Extension",
"profile" : [
"https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Temperaturbedingungen"
]
}
],
"mustSupport" : true
},
{
"id" : "Specimen.processing:lagerprozess.procedure.coding",
"path" : "Specimen.processing.procedure.coding",
"patternCoding" : {
"system" : "http://snomed.info/sct",
"code" : "1186936003"
}
},
{
"id" : "Specimen.processing:lagerprozess.time[x]",
"path" : "Specimen.processing.time[x]",
"min" : 1,
"type" : [
{
"code" : "Period"
}
]
},
{
"id" : "Specimen.processing:lagerprozess.time[x]:timePeriod",
"path" : "Specimen.processing.time[x]",
"sliceName" : "timePeriod",
"type" : [
{
"code" : "Period"
}
]
},
{
"id" : "Specimen.processing:lagerprozess.time[x]:timePeriod.start",
"path" : "Specimen.processing.time[x].start",
"min" : 1
},
{
"id" : "Specimen.container",
"path" : "Specimen.container",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Probenbehältnis"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Specimen container"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Informationen über den Behälter, in dem die Probe aufbewahrt wird."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Information about the container in which the specimen is stored."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"mustSupport" : true
},
{
"id" : "Specimen.container.type",
"path" : "Specimen.container.type",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Containertyp"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Container type"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Der Typ des Probencontainers, der für diese Probe verwendet wurde."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The type of container used for this specimen."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"min" : 1,
"mustSupport" : true,
"binding" : {
"strength" : "extensible",
"valueSet" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/ValueSet/containertyp"
}
},
{
"id" : "Specimen.container.capacity",
"path" : "Specimen.container.capacity",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Containerkapazität"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Capacity"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Die maximale Kapazität des Containers, der für die Probe verwendet wurde."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The maximum capacity of the container used for the specimen."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"mustSupport" : true
},
{
"id" : "Specimen.container.specimenQuantity",
"path" : "Specimen.container.specimenQuantity",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Probenmenge"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Specimen quantity"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Die Menge des gesammelten Materials."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "The amount of material collected."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"mustSupport" : true
},
{
"id" : "Specimen.container.additive[x]",
"path" : "Specimen.container.additive[x]",
"slicing" : {
"discriminator" : [
{
"type" : "type",
"path" : "$this"
}
],
"ordered" : false,
"rules" : "open"
},
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Additiv"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Additives"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Zusatzstoffe, die im Probenbehälter enthalten sind z.B. wie Konservierungsmittel."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Additives contained in the specimen container e.g. preservatives."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"mustSupport" : true
},
{
"id" : "Specimen.container.additive[x]:additiveReference",
"path" : "Specimen.container.additive[x]",
"sliceName" : "additiveReference",
"min" : 0,
"max" : "1",
"type" : [
{
"code" : "Reference",
"targetProfile" : [
"https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Substance"
]
}
]
},
{
"id" : "Specimen.note",
"path" : "Specimen.note",
"_short" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Projektnutzung"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Project usage"
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"_definition" : {
"extension" : [
{
"extension" : [
{
"url" : "lang",
"valueCode" : "de-DE"
},
{
"url" : "content",
"valueString" : "Freitextangabe zur Verwendung der Probe in spezifischen Projekten."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
},
{
"extension" : [
{
"url" : "lang",
"valueCode" : "en-US"
},
{
"url" : "content",
"valueString" : "Free-text information about the use of the specimen in specific projects."
}
],
"url" : "http://hl7.org/fhir/StructureDefinition/translation"
}
]
},
"mustSupport" : true
}
]
},
"text" : {
}
}
XIG built as of ??metadata-date??. Found ??metadata-resources?? resources in ??metadata-packages?? packages.